Source code for hbp_nrp_commons.workspace.sim_util

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"""
This module implements Utility functions used by backend
"""
import os
import errno
import shutil
import logging
import tempfile
from typing import List, Optional

from hbp_nrp_backend import NRPServicesGeneralException
from .settings import Settings

__author__ = 'NRP software team, Hossain Mahmud'

logger = logging.getLogger(__name__)


[docs]class SimUtil: """ Utility methods for a simulation """
[docs] @staticmethod def makedirs(directory: str) -> None: """ Creates [nested] directory if not exists :raises: all errors except directory exists """ try: os.makedirs(directory) except OSError as e: if e.errno != errno.EEXIST: logger.exception('An error happened trying to create %s', directory) raise
[docs] @staticmethod def mkdir(directory: str) -> None: """ Creates [nested] directory if not exists :raises: all errors except directory exists """ SimUtil.makedirs(directory)
[docs] @staticmethod def rmdir(directory: str) -> None: """ Removes [nested] directory if not exists :raises: all errors except directory exists """ shutil.rmtree(os.path.realpath(directory))
[docs] @staticmethod def clear_dir(directory: str) -> None: """ Deletes contents of a directory """ shutil.rmtree(os.path.realpath(directory)) SimUtil.makedirs(directory)
[docs] @staticmethod def init_simulation_dir(sim_id: str) -> str: """ Creates a temporary directory and links it to Settings.sim_dir_symlink :params sim_id: simulation ID of the simulation we're going to create a temp dir for we embed the sim_id into simulation temp dir so the delete_simulation_dir deletes correctly :returns sim_dir: the full path of the address of temp dir for the simulation """ sim_prefix = f'nrp.{str(sim_id)}.' # be sure that sim_id is a str sim_dir = tempfile.mkdtemp(prefix=sim_prefix) sim_dir_symlink = Settings.sim_dir_symlink try: if os.path.exists(sim_dir_symlink): # clean up dirty sim_dir (possibly from some prior crashed simulation) shutil.rmtree(os.path.realpath(sim_dir_symlink)) os.unlink(sim_dir_symlink) os.symlink(sim_dir, sim_dir_symlink) except (IOError, OSError) as err: raise NRPServicesGeneralException( "Could not create symlink to temp simulation folder. {err}".format(err=err), error_type="Server Error") return sim_dir
[docs] @staticmethod def delete_simulation_dir(sim_dir=None): """ Removes simulation directory. Checks that you are deleting the right folder by checking the sim_id. """ try: if os.path.exists(Settings.sim_dir_symlink): current_sim_id = SimUtil.extract_sim_id(os.path.realpath(Settings.sim_dir_symlink)) input_sim_id = SimUtil.extract_sim_id(sim_dir) if (current_sim_id == input_sim_id) or (sim_dir is None): shutil.rmtree(os.path.realpath(Settings.sim_dir_symlink)) os.unlink(Settings.sim_dir_symlink) except (IOError, OSError) as error: raise NRPServicesGeneralException( "Could not access symlink to temp simulation folder. {err}".format(err=error), error_type="Server Error")
[docs] @staticmethod def extract_sim_id(sim_dir: str) -> Optional[int]: """ :param sim_dir: the address of temp folder :return: returns the sim_id embedded in sim_dir. """ try: base_name = os.path.basename(sim_dir) _, sim_id, _ = base_name.split(".", 2) return sim_id except ValueError: return None
[docs] @staticmethod def find_file_in_paths(file_rel_path: str, path_list: List[str]) -> Optional[str]: """ :return: returns the absolute path of the first file found in path_list. if not found, returns and empty string. """ for file_path in (p for p in path_list if os.path.isfile(os.path.join(p, file_rel_path))): return os.path.join(file_path, file_rel_path) return None